Genetic diversity and population structure of Juniperus foetidissima in Arasbaran: Implications for conservation using SCoT markers

Adams R. P. (2014). Junipers of the world: the genus Juniperus. Trafford Publishing.

Al-Yasi H. M., and Al-Qthanin R. (2024). Comparing genetic differentiation and variation using ISSR and SCoT among Juniper plant markers in Saudi Arabia. Frontiers in Plant Science, 15: 1356917.

Andrews C. A. (2010). Natural selection, genetic drift, and gene flow do not act in isolation in natural populations. Nature Education Knowledge, 3(10): 5.

Bruschi P., Vendramin G. G., Bussotti F., and Grossoni P. (2003). Morphological and molecular diversity among Italian populations of Quercus petraea (Fagaceae). Annals of Botany, 91(6): 707-716.

Buer H., Rula S., Wang Z. Y., Fang S., and Bai Y. E. (2022). Analysis of genetic diversity in Prunus sibirica L. in inner Mongolia using SCoT molecular markers. Genetic Resources and Crop Evolution, 69(3): 1057-1068.

Collard B. C., and Mackill D. J. (2009). Start codon targeted (SCoT) polymorphism: a simple, novel DNA marker technique for generating gene-targeted markers in plants. Plant Molecular Biology Reporter, 27: 86-93.

Douaihy B., Vendramin G. G., Boratyński A., Machon N., and Bou Dagher-Kharrat M. (2011). High genetic diversity with moderate differentiation in Juniperus excelsa from Lebanon and the eastern Mediterranean region. AoB Plants, 2011: plr003.

Dzialuk A., Mazur M., Boratyńska K., Montserrat J. M., Romo A., and Boratyński A. (2011). Population genetic structure of Juniperus phoenicea (Cupressaceae) in the western Mediterranean Basin: gradient of diversity on a broad geographical scale. Annals of Forest Science, 68(8): 1341-1350.

Emami S. A., Asili J., Mohagheghi Z., and Hassanzadeh M. K. (2007). Antioxidant activity of leaves and fruits of Iranian conifers. Evidence-Based Complementary and Alternative Medicine, 4: 313-319.

Evren Ö. H., and Kaya N. (2021). High genetic diversity within and low differentiation among Juniperus excelsa M. Bieb. populations: Molecular markers reveal their genetic structure patterns. Turkish Journal of Botany, 45(3): 192-202.

Farhat P., Siljak-Yakovlev S., Takvorian N., Bou Dagher Kharrat M., and Robert T. (2023). Allopolyploidy: An underestimated driver in Juniperus evolution. Life, 13(7): 1479.

Hamzeh’ee B., Safavi S., Asri Y., and Jalili A. (2010). Floristic analysis and a preliminary vegetation description of Arasbaran Biosphere Reserve, NW Iran. Rostaniha, 11(1): 1-16.

Hao J., Jiao K., Yu C., Guo H., Zhu Y., Yang X., and Shen C. (2018). Development of SCoT-based SCAR marker for rapid authentication of Taxus media. Biochemical Genetics, 56: 255-266.

Jadwiszczak K. A., Mazur M., Bona A., Marcysiak K., and Boratyński A. (2024). Soil requirements, genetic diversity and population history of the Juniperus sabina L. varieties in Europe and Asia. Forests, 15(5): 866.

Jime´nez J. F., Werner O., Sa´nchez-Go´mez P., Ferna´ndez S., and Guerra J. (2003). Genetic variations and migration pathway of Juniperus thurifera L. (Cupressaceae) in the western Mediterranean region. Israel Journal of Plant Sciences, 51: 11-22.

Ju T., Han Z. T., Ruhsam M., Li J. L., Tao W. J., Tso S., and Mao K. S. (2022). Reproduction and genetic diversity of Juniperus squamata along an elevational gradient in the Hengduan Mountains. Plant Diversity, 44(4): 369-376.

Kermani M., Maraashi S. H., and Melati F. (2010). Study of genetic variation of Juniperus polycarpus from Tandure National Park of Iran using RAPD markers. Iranian Journal of Rangelands and Forests Plant Breeding and Genetic Research, 18(1): 115-124. (In Persian)

Kim E. H., Shin J. K., Jeong K. S., Lee C. S., and Chung J. M. (2018). Genetic variation and structure of Juniperus chinensis L. (Cupressaceae) in Korea. Journal of Ecology and Environment, 42(1): 1-9.

Khoshal Sarmast M., Mosavizadeh S. J., and Sharifani M. (2018). Evaluation of Junipers spp. Genetic Diversity in Northern Iran using ISSR Markers. Ecology of Iranian Forests, 6(11): 14-20. (In Persian)

Korshikov I. I., and Nikolaeva A. V. (2013). Genetic variability of tall junipers (Juniperus excelsa Bieb.) on the northern and southern boundaries of their natural distribution. Cytology and Genetics, 47(3): 156-163.

Lu D., Huang H., Wang A., and Zhang G. (2022). Genetic Evaluation of Juniperus sabina L. (Cupressaceae) in Arid and Semi-Arid Regions of China Based on SSR Markers. Forests, 13(2): 231.

Luo C., He X. H., Chen H., Ou S. J., and Gao M. P. (2010). Analysis of diversity and relationships among mango cultivars using Start Codon Targeted (SCoT) markers. Biochemical Systematics and Ecology, 38(6): 1176-1184.

Mao K., Hao G., Liu J., Adams R. P., and Milne R. I. (2010). Diversification and biogeography of Juniperus (Cupressaceae): variable diversification rates and multiple intercontinental dispersals. New Phytologist, 188(1): 254-272.

Meloni M., Perini D., Filigheddu R., and Binelli G. (2006). Genetic variation in five Mediterranean populations of Juniperus phoenicea as revealed by inter-simple sequence repeat (ISSR) markers. Annals of Botany, 97(2): 299-304.

Mertiri I., Păcularu-Burada B., and Stănciuc N. (2024). Phytochemical characterization and antibacterial activity of Albanian Juniperus communis and Juniperus oxycedrus berries and needle leaves extracts. Antioxidants, 13(3): 345.

Merwe M. V. D., Winfield M. O., Arnold G. M., and Parker J. S. (2000). Spatial and temporal aspects of the genetic structure of Juniperus communis populations. Molecular Ecology, 9(4): 379-386.

Michalczyk I. M. (2008). Application of DNA marker systems to test for genetic imprints of habitat fragmentation in Juniperus communis L. on different spatial and temporal scales: Integration of scientific knowledge into conservation measures (Doctoral dissertation, Marburg, Univ., Diss., 2008).

Motahari B., Shabanian N., Rahmani M. S., and Mohammad-Hasani F. (2021). Genetic diversity and genetic structure of Acer monspessulanum L. across Zagros forests of Iran using molecular markers. Gene, 769: 145245.

Nagy S., Poczai P., Cernák I., Gorji A. M., Hegedűs G., and Taller J. (2012). PICcalc: an online program to calculate polymorphic information content for molecular genetic studies. Biochemical Genetics, 50: 670-672.

Nei M. (1972). Genetic distance between populations. The American Naturalist, 106(949): 283-292.

Nybom H. (2004). Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Molecular Ecology, 13(5): 1143-1155.

Opgenoorth L., Vendramin G. G., Mao K., Miehe G., Miehe S., Liepelt S., and Ziegenhagen B. (2010). Tree endurance on the Tibetan Plateau marks the world’s highest known tree line of the Last Glacial Maximum. New Phytologist, 185(1): 332-342.

Pan L., Zhou T., Chen C., Xu H., and Wang W. (2024). Phytochemistry, pharmacology, and traditional medicine applications of Juniperus sabina L.: A comprehensive overview. Molecules, 29(24): 5876.

Peakall R., and Smouse P. E. (2012). GenAlEx 6.5: Genetic analysis in Excel. Population genetic software for teaching and research—an update. Bioinformatics, 28: 2537-2539.

Rahimian Boogar A., and Salehi H. (2021). ISSR-based genetic diversity assessment of five populations of Juniperus polycarpos K. Koch in southern habitats of Iran. Flower and Ornamental Plants, 6(1): 1-12. (In Persian)

Renau‐Morata B., Nebauer S. G., Sales E., Allainguillaume J., Caligari P., and Segura J. (2005). Genetic diversity and structure of natural and managed populations of Cedrus atlantica (Pinaceae) assessed using random amplified polymorphic DNA. American Journal of Botany, 92(5): 875-884.

Rohlf F. J. (2000). NTSYS 2.1: numerical taxonomic and multivariate analysis system. New York, Exeter Software.

Saghai-Maroof M. A., Soliman K. M., Jorgensen R. A., and Allard R. (1984). Ribosomal DNA spacer-length polymorphisms in barley: mendelian inheritance, chromosomal location, and population dynamics. Proceedings of the National Academy of Sciences, 81(24): 8014-8018.

Teixeira H., Rodriguez-Echeverria S., and Nabais C. (2014). Genetic diversity and differentiation of Juniperus thurifera in Spain and Morocco as determined by SSR. PLoS One, 9(2): e88996.

Terrab A., Schönswetter P., Talavera S., Vela E., and Stuessy T. F. (2008). Range-wide phylogeography of Juniperus thurifera L., a presumptive keystone species of western Mediterranean vegetation during cold stages of the Pleistocene. Molecular Phylogenetics and Evolution, 48(1): 94-102.

Vivodík M., Balážová Ž., Gálová Z., and Petrovičová L. (2019). Start codon targeted polymorphism for evaluation of functional genetic variation and relationships in cultivated castor (Ricinus communis L.) genotypes. Genetika, 51(1): 137-146.

Yermagambetova M., Almerekova S., Turginov O., Sultangaziev O., Abugalieva S., and Turuspekov Y. (2023). Genetic Diversity and Population Structure of Juniperus seravschanica Kom. Collected in Central Asia. Plants, 12(16): 2961.

Yermagambetova M. M., Almerekova S. S., Abugalieva S. I., Turginov O., Sultangaziev O., and Turuspekov Y. K. (2024). Genetic diversity and population structure of juniperus seravschanica kom. in central asia revealed by microsatellite markers. Eurasian Journal of Applied Biotechnology, (3S). DOI: https://doi.org/10.11134/symposium.10.

Yücedağ C., and Gailing O. (2013). Genetic variation and differentiation in Juniperus excelsa M. Bieb. populations in Turkey. Trees, 27: 547-554.